Combatting site effects to investigate autism spectrum disorder in a large multi-site diffusion tensor imaging sample

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School of Engineering and Applied Science::Department of Bioengineering::Departmental Papers (BE)
Degree type
Discipline
Data Science
Neuroscience and Neurobiology
Psychiatry and Psychology
Subject
Autism
Harmonization
Big Data
Diffusion MRI
Multisite Study
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Copyright date
2024-05
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Author
Wingert, Isabel A.
Parker, Drew
Reckner, Erin
Thourani, Naveen
Shen, Rui Sherry
Tunç, Birkan
Yerys, Benjamin E.
Verma, Ragini
Contributor
Abstract

Diffusion tensor imaging (DTI) is a valuable medical imaging technique for characterizing white matter (WM) in the brain. Numerous DTI studies have demonstrated reduced WM integrity in samples with autism spectrum disorder (ASD) diagnoses, as evidenced by lower fractional anisotropy (FA) values, especially in the corpus callosum (CC) (Hrdlicka, 2019), suggesting the potential of developing imaging biomarkers. This requires large sample sizes that can be achieved by aggregating data across multiple studies. This is hampered by variations in both equipment and scanner parameters, leading to confounding between site-specific effects and biological covariates. It is common to attempt to mitigate site effects by including a site term in analysis. Alternatively, data harmonization with ComBat (Fortin et al, 2018) obviates the need to control for site during analysis, allowing integration of patient data from different sources. The goal of this project is to demonstrate the importance of ComBat harmonization in mitigating non-biological site-specific sources of variation (equipment, scan parameters). Another goal was to determine if clinical group differences are enhanced after data harmonization.

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Date of presentation
2024-05
Conference name
International Society for Autism Research Annual Meeting (INSAR)
Conference dates
2024-05
Conference location
Melbourne, Australia
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